Hi Andrew, I'm generating the geotiffs from the older spreadsheet for testing purposes, their outputs will be in: /lustre/bbue/ch4/ime_gtif Could you take a look at the geotiffs to make sure I have the map projection right? I might need to flip a rotation sign and/or do a bit of shifting/scaling if there are any offsets in the output coords. After that, I've set up symlinks to the the compute_ime script on the CORAL SDS in /lustre/bbue/ch4/compute_ime, so could you try running it for the latest spreadsheet? The syntax is: /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py [xlsfile] [worksheet] -o [outdir] For example, the command I ran to generate the latest set of products above was: /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py Source_Master_List_Sort_20170712.xlsx "Fall 2016_AVng_Source_Fluxes" -o /lustre/bbue/ch4/ime_gtif The quotes are necessary for the worksheet name if it contains any spaces. _B Hi Andrew, Just started running the updated code which should fix the mapping issue, output will be in /lustre/bbue/ch4/ime_gtif_v2/. I spot checked a couple of the new .gtifs and their bounding extents all fell within the extent of their corresponding flightline after the update. The orientation and scale should remain correct, but let me know if you find any error cases. Folder permissions fixed. Though you can just pass the full path to the spreadsheet (e.g., /home/bbue/Research/srcfinder/Source_Master_List_Sort_20170712.xlsx) and provide a different outdir if you want to. I'd probably not use ime_gtif_v2 since I'm writing to that path at the moment. :) _B ________________________________ To calc IME: cat /lustre/bbue/ch4/ime_gtif_v3/ang2016*/*_ime.txt|sort|uniq >> /lustre/athorpe/ch4/ime_gtif_v3_mergedist50/imevals_gtif_v3.txt cat /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_20170817/ang2017*/*_ime.txt|sort|uniq >> /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_20170817/imevals_gtif_20170817.txt To run: /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py /lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_20170817 Using different conc threshold /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py -p 1000 lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -m [10] /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -m [float(1000)] /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -p 1000 /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -f [200] /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -m [5] /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -p 1000 -m 10 25 -f 200 /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170822.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -f 200 /shared/anaconda2/bin/python2.7 /lustre/bbue/ch4/compute_ime/compute_ime.py /lustre/athorpe/ch4/gen_ime_geotif/input/SP17_Master_Source_List_IME_20170823.xlsx "SP17 plumes 2" -o /lustre/athorpe/ch4/gen_ime_geotif/output/ime_gtif_1000ppmmm_20170817 -p 1000 Copy only TIF from merge50: cp /lustre/athorpe/ch4/Test_GeoTIFF/v3/ang2016*/mergedist50/*.tif /lustre/athorpe/ch4/Test_GeoTIFF/v3/c cp /lustre/bbue/ch4/ime_gtif_v3/ang2016*/mergedist50/*.tif /lustre/athorpe/ch4/ime_gtif_v3_mergedist50 Count files: find /lustre/bbue/ch4/ime_gtif_v3/ang2016*/mergedist50/*.tif | wc find /lustre/athorpe/ch4/ime_gtif_v3_mergedist50/*.tif | wc Count folders: find /lustre/bbue/ch4/ime_gtif_v3 -maxdepth 1 -type d -print| wc -1